ATF6 Antibody (70B1413.1)

Images

 
Western Blot: ATF6 Antibody (70B1413.1) [NBP1-40256] - Lane 1: 293 cells transfected with full-length ATF6. Lane 2: 293 cells transfected with partial length ATF6 (amino acids 1-373). Lane 3: Untransfected 293 cells. ...read more
Biological Strategies: Western Blot: ATF6 Antibody (70B1413.1) [NBP1-40256] - Image of anti-ATF6. Whole cell protein from Hek293 and HepG2 treated with and without 10 mM DTT was separated on a 7.5% gel by ...read more
Western Blot: ATF6 Antibody (70B1413.1) [NBP1-40256] - Analysis of ATF6 in mouse liver tissue using 3 ug/ml of ATF6 antibody and 0.25 ug/ml of GAPDH antibody. Lane A contains 20 ugs of whole mouse liver lysate, lane B ...read more
Immunocytochemistry/ Immunofluorescence: ATF6 Antibody (70B1413.1) [NBP1-40256] - Untreated HeLa cells were fixed in -20C methanol for 10 min, air dried and rehydrated in PBS at room temperature for 5 minutes. Cells ...read more
Immunohistochemistry-Paraffin: ATF6 Antibody (70B1413.1) [NBP1-40256] - Human placenta, followed by biotinylated horse anti-mouse IgG secondary antibody, alkaline phosphatase-streptavidin and chromogen. Dilution 10ug/ml
Flow Cytometry: ATF6 Antibody (70B1413.1) [NBP1-40256] - Intracellular flow cytometric staining of 1 x 10^6 MCF-7 cells using ATF6 antibody (dark blue). Isotype control shown in orange. An antibody concentration of 1 ...read more
Biological Strategies: Western Blot: ATF6 Antibody (70B1413.1) [NBP1-40256] - Image of anti-ATF6. Whole cell protein from HeLa cells treated with and without 10 mM DTT was separated on a 7.5% gel by SDS-PAGE, ...read more
Flow (Intracellular): ATF6 Antibody (70B1413.1) [NBP1-40256] - An intracellular stain was performed on HeLa cells with ATF6 Antibody (70B1413.1) NBP1-40256F (blue) and a matched isotype control (orange). Cells were ...read more
Western Blot: ATF6 Antibody (70B1413.1) [NBP1-40256] - Analysis of ATF6 in NIH3T3 cell lysate using NBP1-40256 at 3 ug/ml. A band corresponding to full-length ATF6 was detected. We have not characterized the ~36 kDa ...read more

Product Details

Summary
Reactivity Hu, Mu, Rt, Po, RbSpecies Glossary
Applications WB, ChIP, Flow, Flow-IC, IB, ICC/IF, IHC, IHC-Fr, IHC-P, IP, CyTOF-ready
Clone
70B1413.1
Clonality
Monoclonal
Host
Mouse
Conjugate
Unconjugated
Concentration
1.0 mg/ml
Validated by:
   

Biological Strategies

     

ATF6 Antibody (70B1413.1) Summary

Description
(1) The ATF6 (IMG-273) has been cited to recognize both full-length and cleaved forms of ATF6. Please refer to the references in the Product Citation list for more comprehensive information.

(2) The ATF6 transfected cell lysate (40210) is recommended as a useful western blot positive control to run in parallel with your experimental samples.

(3) Active/cleaved forms of ATF6 are generated through proteolytic cleavage during ER stress. Different molecular weights have been described for cleaved forms. A sample protocol was first described in Luo and Lee (2002) wherein NIH3T3 cells were treated with the amino acid analogue azetidine (AzC), and full-length and cleaved forms ATF6 were detected with IMG-273. The results show that in addition to the major 90 kDa full length ATF6, protein bands over the range of 50-70 kDa were detectable following AzC treatment (Luo and Lee, 2002: Figure 4A, page 791). Many protocols and other cleaved forms have been described since, please consult the literature for additional information.

(4) For immunofluorescence microscopy, cells were fixed in methanol at -20 degrees C (Thomas et al, 2005). Thomas et al used immunofluorescence to identify ATF6 with IMG-273 in the nucleus.

(5) The active/cleaved 50 kDa nuclear form of ATF6 using IMG-273 has been found to be strongly expressed in certain tumor cell lines derived from B cell lymphoma (DEL), primary effusion lymphoma [BC-3 (ATCC CRL-2277), PEL-SY, HBL-6], lymphoblastic leukemia (DS-1) and multiple myeloma (RPMI-8226, NCI-H929), (Jenner et al. 2003).

(6) Cleaved 60 and 36 kDa ATF6 forms have also been described in the nucleus (Mao et al, 2007).

(7) The ATF6 antibody is reported to be specific for ATF6a, recognizing ATF6a but not ATF6b (Bommiasamy et al, 2009).

(8) In western blots, the binding pattern of ATF6 may vary. Researchers are encouraged to consult the body of literature citing the ATF6 IMG-273 antibody (see Product citation list) for additional information. General ATF6 literature is also helpful. For example, Yoshida (1998) show a multiple band pattern in HeLa in both untreated and stressed cells (Fig 11B). In this early landmark ATF6 publication, multiple bands were seen between the 66 and 116 kDa markers as well as one or more bands between the 45 and 66 kDa markers.

(9) We highly recommend the use of a maximum sensitivity ECL substrate (Femto sensitive) for efficient detection of this antibody in Western blot applications.
Immunogen
This monoclonal antibody was made against a partial protein containing amino acids 1-273 of human ATF6.
Specificity
This ATF6 antibody detects both the full length and the cleaved/active protein.
Isotype
IgG1 Kappa
Clonality
Monoclonal
Host
Mouse
Gene
ATF6
Purity
Protein G purified
Innovator's Reward
Test in a species/application not listed above to receive a full credit towards a future purchase.

Applications/Dilutions

Dilutions
  • Western Blot 1-5 ug/ml
  • Chromatin Immunoprecipitation 1:10 - 1:500
  • Flow Cytometry 1 ug per million cells
  • Immunoblotting
  • Immunocytochemistry/Immunofluorescence 1:10-1:500
  • Immunohistochemistry 1:10-1:500
  • Immunohistochemistry-Frozen 1:10-1:500
  • Immunohistochemistry-Paraffin 1:50
  • Immunoprecipitation 1:10-1:500
  • CyTOF-ready
  • Flow (Intracellular)
Application Notes
ICC: See Thomas et al (2005) and Kikuchi et al (2006) for details. Immunohistochemistry (Frozen): See Zhu et al (2008) for details. Immunohistochemistry (Paraffin): See van Kollenburg et al (2006) for details. Immunoprecipitation: See Hong et al, 2004 for details. Use in Immunoblotting reported in scientific literature (PMID 28550308). In Western blot do not use milk in the diluent as it can inhibit the observed signal. This antibody is CyTOF ready.
Control
ATF6 Lysate (NBP1-70778)
Reviewed Applications
Read 2 Reviews rated 3
using
NBP1-40256 in the following applications:

Publications
Read Publications using
NBP1-40256 in the following applications:

  • 3 publications
  • IB
    1 publication
  • 9 publications
  • IHC
    1 publication
  • 3 publications
  • 2 publications
  • WB
    118 publications

Packaging, Storage & Formulations

Storage
Store at 4C short term. Aliquot and store at -20C long term. Avoid freeze-thaw cycles.
Buffer
TBS
Preservative
0.05% Sodium Azide
Concentration
1.0 mg/ml
Purity
Protein G purified

Alternate Names for ATF6 Antibody (70B1413.1)

  • ACHM7
  • Activating transcription factor 6 alpha
  • activating transcription factor 6
  • atf6 a
  • ATF6 alpha
  • ATF6
  • ATF6A
  • ATF6-alpha
  • cAMP-dependent transcription factor ATF-6 alpha
  • cyclic AMP-dependent transcription factor ATF-6 alpha

Background

ATF6 is a constitutively expressed, endoplasmic reticulum (ER) membrane-anchored transcription factor. ATF6 is a key transcriptional activator of the unfolded protein response (UPR), which allows mammalian cells to maintain cellular homeostasis when they are subjected to environmental and physiological stresses that target the ER (reviewed in Shen, 2005 & Prywes, 2005). The C-terminus of ATF6 is located in the ER lumen and its N-terminal DNA binding domain faces the cytosol. AFT6 plays a key role in the ER stress response by transmitting the ER stress signal across the ER membrane into the nucleus. The induction of new gene expression by ATF6 is an important aspect of the ER stress response. In response to certain stress conditions, ATF6 translocates from the ER to the Golgi. The 90 kDa full-length ATF6 is processed within the Golgi to its active 50 kDa form through sequential cleavage by site-1 and site-2 proteases (S1P and S2P). Proteolytic activation of ATF6 in the ER stress response is a mechanism to regulate membrane-bound factors, and is referred to as regulated intramembrane proteolysis. The N-terminal active ATF6 translocates to the nucleus where it binds to ER stress-response elements in ER stress-response genes (ERSRGs). ATF6 is a potent transcriptional activator of ERSRGs. The fully glycosylated form of ATF6, a 670 amino acid protein, exhibits an electrophoretic mobility of ~90 kDa in denaturing SDS-gels, in part because of the glycosylated modifications. ATF6 has 3 consensus sites for N-linked glycosylation and exists constitutively as a glycosylated protein. Differentially glycosylated ATF6 forms may result from mutations or experimental treatment.

Limitations

This product is for research use only and is not approved for use in humans or in clinical diagnosis. Primary Antibodies are guaranteed for 1 year from date of receipt.

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Publications for ATF6 Antibody (NBP1-40256)(163)

We have publications tested in 5 confirmed species: Human, Mouse, Rat, Porcine, Rabbit.

We have publications tested in 7 applications: ChIP, IB, ICC/IF, IHC, IHC-Fr, IHC-P, WB.


Filter By Application
ChIP
(3)
IB
(1)
ICC/IF
(9)
IHC
(1)
IHC-Fr
(3)
IHC-P
(2)
WB
(118)
All Applications
Filter By Species
Human
(32)
Mouse
(52)
Rat
(16)
Porcine
(2)
Rabbit
(1)
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Showing Publications 1 - 10 of 163. Show All 163 Publications.
Publications using NBP1-40256 Applications Species
Ayaub EA, Tandon k, Padwal M et al. IL-6 mediates ER expansion during hyperpolarization of alternatively activated macrophages. Immunol. Cell Biol. Oct 9 2018 [PMID: 30298952] (ICC/IF, Mouse) ICC/IF Mouse
Fink EE, Moparthy S, Bagati A et al. XBP1-kLF9 Axis Acts as a Molecular Rheostat to Control the Transition from Adaptive to Cytotoxic Unfolded Protein Response. Cell Rep. Oct 2 2018 [PMID: 30282030] (WB, Mouse) WB Mouse
Pang X, Zhang Y, Shi X et al. ERp44 depletion exacerbates ER stress and aggravates diabetic nephropathy in db/db mice. Biochem. Biophys. Res. Commun. Sep 14 2018 [PMID: 30224065] (WB, Mouse) WB Mouse
Burman A, Kropski JA, Calvi CL et al. Localized hypoxia links ER stress to lung fibrosis through induction of C/EBP homologous protein JCI Insight Aug 23 2018 [PMID: 30135303] (WB, Mouse) WB Mouse
Ogata S, Kameda K, Kono T et al. Expressions of ATF6, XBP1, and GRP78 in normal tissue, atypical adenomatous hyperplasia, and adenocarcinoma of the lung Hum. Pathol. Aug 16 2018 [PMID: 30121368] (WB, Human) WB Human
Kristensen CM, Dethlefsen MM, Tondering AS et al. PGC-1a in hepatic UPR during high-fat high-fructose diet and exercise training in mice Physiol Rep Aug 1 2018 [PMID: 30105901] (WB, Mouse) WB Mouse
Lewis SA, Takimoto T, Mehrvar S et al. The effect of Tmem135 overexpression on the mouse heart PLoS ONE Aug 13 2018 [PMID: 30102730] (WB, Mouse) WB Mouse
kristensen CM, Olsen MA, Jessen H et al. PGC-1a in exercise and fasting-induced regulation of hepatic UPR in mice. Pflugers Arch. Jun 30 2018 [PMID: 29961149] (WB, Mouse) WB Mouse
kristensen CM, Jessen H, Ringholm S, Pilegaard H. Muscle PGC-1a in exercise and fasting-induced regulation of hepatic UPR in mice. Acta Physiol (Oxf). Jun 25 2018 [PMID: 29939478] (WB, Mouse) WB Mouse
Deodati A, Argemi J, Germani D et al. The exposure to uteroplacental insufficiency is associated with activation of unfolded protein response in postnatal life. PLoS ONE. Jun 13 2018 [PMID: 29897997] (WB, Rat) WB Rat
Show All 163 Publications.

Reviews for ATF6 Antibody (NBP1-40256) (2) 32

Average Rating: 3
(Based on 2 reviews)
We have 2 reviews tested in 2 species: Mouse, Rat.

Reviews using NBP1-40256:
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WB
(1)
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Mouse
(1)
Rat
(1)
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Images Ratings Applications Species Date Details
 ATF6 NBP1-40256
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reviewed by:
yann Jaudouin
Rat 09/14/2018
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Summary

Sample Testedcultured embryonic cortical neuron lysate 0
SpeciesRat
LotA-7

Comments

CommentsLysate protein cortical neuron 0,2 mg/ml.
test antibody: 1/25e, 1/50e, 1/100e
Western Blot ATF6 NBP1-40256
Enlarge
reviewed by:
Shinobu Miyazaki
WB Mouse 03/18/2016
View

Summary

ApplicationWestern Blot
Sample TestedWhole cell lysate
SpeciesMouse
LotAB121107A-09

Blocking

Blocking Details5% milk/ 1x TBST 1hour

Primary Anitbody

Dilution Ratio1:1000, over night 4 degree

Details

Detection NotesECL

Product General Protocols

Video Protocols

WB Video Protocol
ChIP Video Protocol
ChIP Webinar
ICC/IF Video Protocol

FAQs for ATF6 Antibody (NBP1-40256). (Showing 1 - 5 of 5 FAQs).

  1. We are looking for an antibody specific to ATF6 alpha that will not cross-react with ATF6 beta. Would you please help confirm if any of the following are ATF6 alpha specific antibodies: NBP1-40256, NBP1-77251, NBP1-76675 & NBP1-41439?
    • The antibodies NBP1-77251 and NBP1-76675 are specific to ATF6 alpha and should not cross-react with ATF6 beta.
  2. I learn from your company web that you are providing atf6, xbp1, cbx4 antibodies against human for immunofluorescence. And from the provided pictures, it seems very good. But I am wondering if anyone use them for immunofluorescence in human cells in your memory or in published papers? And how about them? By the way, you are providing free sample size for the atf6, xbp1 antibodies, aren't you? Could you send me some for tests? One more question, do they work on endogenous proteins but not only on overexpressed proteins?
    • These products have been validated for use in IF on human: catalog numbers NBP1-40256, NB100-80861, and NBP1-83225. Yes these antibodies should work on the native protein/endogenous protein.
  3. Is there a blocking peptide available for your ATF6 antibody (NBP1-40256)?
    • This antibody was made against a partial recombinant protein (not a short peptide). As such we do not have a blocking peptide for this antibody nor do we have a blocking protein. We do however have a positive control, ready to use ATF6 lysate NBP1-70778.
  4. IS THIS ATF6 ANTIBODY FOR WESTERN BLOT FROM MOUSE? SO WE NEED THE ANTI-MOUSE SECONDARY?
    • NBP1-40256 (ATF6 Antibody/70B1413.1) can be used in WB with mouse tissue/cell line samples. We have many secondary antibodies that can potentially be used with NBP1-40256. However, since the primary antibody has an isotype of IgG1, it is better to use the WB-validated anti-mouse IgG1 secondary antibodies.
  5. We are having trouble with the following antibody, we did not observe any signal for ATF6 (full length or cleaved), only a non-specific band at around 37 kDa. We've tested on human MRC-5 fibrablasts. Do you have any suggestions that may be helpful to us? 
    • The nature of the protein target ATF6 is differently expressed as the unglycosylated and/or glycosylated forms, with the different levels of glycosylation (http://www.uniprot.org/uniprot/P18850#ptm_processing), in the different organs/tissues/cells under the different physiological/pathological conditions. This ATF6 Antibody/70B1413.1 is a mouse monoclonal antibody with a very narrow epitope (even though we don't map any epitopes for our antibodies, it is known that almost all monoclonal epitopes have the sizes less than 15 a.a.). In other words, NBP1-40256 can bind to the full-length ATF6 and the long fragment of the cleaved protein target (not both cleaved protein species, and see #3 below). In order to detect the full-length and both two cleaved fragments of ATF6, the immunogen has to extend before and after the cleavage site at a.a. 419/420, in both directions, and therefore the epitopes can present in both sides of the cleavage site.  ATF6 has 1 transmembrane domain, 1 leucine-zipper, and three glycosylation sites that could affect the mobility in electrophoresis. As the rule of thumb, we use 110 Da as an average of one amino acid. Therefore the full-length ATF6 gives 73,700 Da (vs. 74,585 Da calculated by the exact sequence). Since it is cleaved at a.a. 419 of ATF6, two fragments will be 419 a.a. and 251 a.a. (670 - 419). Take each of them and times 110 Da individually, and these are the results: 46,090 Da and 27,610 Da (the estimated values), respectively.  Thefore your ~37 kDa species might be the short protein species with glycosylations (please double check with #1 above). Finally, we would like to suggest two things: please include other human cell lines as the controls: "http://www.proteinatlas.org/ENSG00000118217-ATF6/antibody" shows the WB positive results derived from using two cell lines and one organ. These could be used as the positive control. Also, the glycosylation levels are likely to be different in the different cells/tissues/organs, and therefor the different sizes of ATF can be viewed.  The second thing is to use a real positive control lysate, such as ATF6 cell lysate or ATF6 overexpression lysate ( http://www.novusbio.com/productsearch?keys=atf6&_=1456165537185&fq[category]=Lysates), for the specificity of NBP1-40256.

Control Lysate(s)

Secondary Antibodies

 

Isotype Controls

Other Available Formats

Alexa Fluor 405 Labeled NBP1-40256AF405
Alexa Fluor 488 Labeled NBP1-40256AF488
Alexa Fluor 647 Labeled NBP1-40256AF647
Alexa Fluor 700 Labeled NBP1-40256AF700
Allophycocyanin Labeled NBP1-40256APC
Biotin Labeled NBP1-40256B
DyLight 350 Labeled NBP1-40256UV
DyLight 405 Labeled NBP1-40256V
DyLight 488 Labeled NBP1-40256G
DyLight 550 Labeled NBP1-40256R
DyLight 650 Labeled NBP1-40256C
DyLight 680 Labeled NBP1-40256FR
DyLight 755 Labeled NBP1-40256IR
HRP Labeled NBP1-40256H
PE Labeled NBP1-40256PE
PerCP Labeled NBP1-40256PCP

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Blogs on ATF6.

ATF6 - monitoring and regulating protein folding under cellular stress
During times of cellular stress overloading of the protein folding machinery leads to the accumulation of incorrectly folded proteins. This triggers the unfolded protein response (UPR) in order to try to reestablish homeostasis or, if this fails, t...  Read full blog post.

ATF6 - a key target in alcohol-induced fatty liver disease?
The ATF6 endoplasmic reticulum (ER) stress-regulated transcription factor is constitutively expressed and plays a central role in the mammalian unfolded protein response (UPR). This fundamental pathway is responsible for balancing cellular hom...  Read full blog post.

A Key to Fight Stress: ATF6
The protein ATF6 is a constitutively expressed transcription factor that is a key mediator of the unfolded protein response (UPR) that allows mammalian cells to maintain cellular homeostasis under conditions of environmental and physiological stress....  Read full blog post.

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Recent Reviews

3
5
1
4
0
3
0
2
0
1
1

yann Jaudouin
09/14/2018
Application:
Species: Rat

Shinobu Miyazaki
03/18/2016
Application: WB
Species: Mouse

Bioinformatics

Gene Symbol ATF6
Entrez
Uniprot