Antibody News

NUT - A Protein Coding Gene

Friday, August 15, 2014 - 14:27

The NUT gene is found on chromosome 15q14 and encodes for the NUT protein which is a key component of the RNA polymerase II Mediator complex. This multi-subunit assembly is required for all RNA pol II-dependent transcriptional activation, coordinating both nuclear and mitochondrial gene transcription. The complex also includes pol II, and transcription factors TFIIA-F. It serves as a central scaffold within the pre-initiation complex (PIC) responsible for converting biological stimuli (in the form of transcription factors) into gene expression responses. A good review of Mediator function and influencing factors can be found in Poss et al1.

Immunohistochemistry-Paraffin: NUT Antibody...

Neurofibromatosis Infographic

Thursday, August 14, 2014 - 11:07

Neurofibromatosis (NF) is a genetic disorder caused by mutations in the NF1, NF2 or SMARCB1 genes which lead to tumor growth on nerves throughout the body. Although the tumors are usually benign, they still require chemotherapy to shrink and may become cancerous. Surgery is often attempted as treatment, however tumor placement on sensitive areas such as spinal cord and optic nerve make this option more difficult.

Neurofibromatosis Infographic

Resources

  1. CTF.org 
  2. Mayo Clinic ...

NALP4 - Mediator of Programmed Cell Death

Wednesday, August 13, 2014 - 14:26

The NALP family consists of cytoplasmic proteins within the larger CATERPILLER protein family. There exist in short forms (such as NALP4) and long forms (NALP1). NALP proteins include the apoptosis regulator apoptotic protease activating factor 1 (APAF1) and mammalian NOD-LRR proteins, and are thought to play a role in the inflammation and reproduction processes. They play a key role in the formation of large signal-induced proinflammatory multiprotein complexes termed "inflammasomes", as published in a Nature Molecular Cell Biology 2003 review by Tschopp, more recently reviewed by Boaru1,2. NALP4 is also involved in modulating NF-kB activity.

MDA5 - Part of the RIG-I-like Receptor Family

Monday, August 11, 2014 - 14:34

The innate immune system is responsible for reacting to viral infections through recognition of various viral components. Like toll-like receptor 3 (TLR3), MDA5 recognizes double-stranded (ds) RNA which is a molecular pattern indicative of viral infection. MDA5 and its relative RIG-1 recognize different types of dsRNA, with MDA5 recognizing poly (I:C). MDA5 is a member of the DEAD/DEAH-box RNA helicase family, which all contain the conserved DEAD motif of Asp-Glu-Ala-Asp. DEAD box proteins are implicated in a number of cellular processes involving RNA secondary structure alteration - translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. When stimulated by dsRNA, MDA5 recruits the adaptor protein VISA and ultimately activates...

Mannose 6 Phosphate Receptor: Once you're tagged, there's no going back!

Thursday, August 7, 2014 - 13:57

Mannose 6 phosphate (M6P) is a sequence tag that plays a pivotal role in transporting proteins from the Golgi complex and cell surface to the lysosome. The M6P sequence is tagged to the N-linked oligosaccharides of lysosomal hydrolases as they traverse the cis-Golgi apparatus. Upon M6P-tagging, these proteins are targeted to the late endosome via vesicular transport. Low pH conditions there mediate the dissociation of a M6P Receptor from its ligand, allowing recycling of the M6P sequences. Furthermore, M6P is bound by lectin in the immune system, and is converted to fructose 6-phosphate by mannose phosphate isomerase.

iNOS: The Nitric Oxide Boss

Wednesday, August 6, 2014 - 15:35

Nitric oxide (NO) is an inorganic, gaseous, and reactive free radical that acts as a biologic mediator in processes such as neurotransmission, vasorelaxation, and cytotoxicity. In addition, it has antimicrobial and anti-tumoral activities. NO production is mediated by members of the nitric oxide synthase (NOS) family. The NOS enzyme catalyzes the oxidization of L-arginine into L-citrulline and NO.  Several subtypes have been identified: two constitutive isoforms (type I brain/neuronal NOS, and type III endothelial) and one inducible isoform (iNOS, or type II).

Immunohistochemistry-Paraffin: iNOS Antibody Immunohistochemistry-Paraffin: iNOS Antibody

iNOS is found in a variety of cell types including macrophages, hepatocytes, synoviocytes, and...

Interleukin 6 (IL-6) - I can change your body's temperature set point!

Tuesday, August 5, 2014 - 15:13

IL-6 is an immunoregulatory cytokine that functions in inflammation and B-cell maturation. It was originally identified as a B-cell differentiation factor. It is primarily made at sites of acute and chronic inflammation, where it is secreted into serum and induces a transcriptional inflammatory response through the cell surface assembly of interleukin-6 alpha receptor (IL-6R, alpha) and the signaling receptor gp130. IL-6 functions in a large and wide variety of inflammation-associated disease states, including fever and the acute phase response, energy mobilization, innate immunity response, and susceptibility to diabetes mellitus and systemic juvenile rheumatoid arthritis. Rincon and Irvin give a thorough overview of the role of IL-6 in asthma and pulmonary inflammatory diseases1. Additionally, IL-6 functions in the...

ABCA1 - The Caretaker for Cholesterol Transportation

Monday, August 4, 2014 - 15:41

The ATP-binding cassette transporter A1 (ABCA1) protein is a key gatekeeper for regulating intracellular cholesterol transport. It is one member of a large family of genes comprised of cAMP-dependent anion transporter cell membrane proteins. These important proteins regulate reverse cholesterol efflux from cells into the peripheral tissues via apolipoprotein A-1 (apo). ABCA1 in particular has a diverse expression profile and is most highly expressed in macrophages. Sporstol's group performed real-time RT-PCR and immunoblotting with the ABCA1 antibody to create detailed expression pattern profiles of their identified cholesterol metabolism targets (scavenger receptor type B class I (SR-BI), ABCA1, and ABC transporter G1 (ABCG1) proteins)1. A research group from the Cornell Medical Center used the ABCA1...

CD11b - More than a microglial marker

Wednesday, July 30, 2014 - 12:38

The protein CD11b has been implicated in the various adhesion-related interactions of cells such as monocytes, macrophages, natural killer (NK) cells, and granulocytes. It is part of a heterodimer that consists of CD11b and CD18. It also modulates the uptake of complement-coated particles within the cell. It is commonly used as a microglial marker in tissues derived from the nervous system. Immunoblotting experiments with the CD11b antibody from Wong’s lab indicate that hypoxia-inducible factor 1 (HIF-1) critically regulates breast cancer metastases by priming the lung niche microenvironment before the arrival of secondary tumor cells1. The same group used the CD11b antibody in their follow-up studies where they monitored the effects of two distinct HIF inhibitors – digoxin and acriflavine – on niche formation2...

Amyotrophic Lateral Sclerosis Infographic

Tuesday, July 29, 2014 - 11:27

Amyotrophic lateral sclerosis is a neurological disease which impacts motor neurons that are involved in muscle movement throughout the body. The progressive degeneration of neurons causes weakened muscles and can lead to paralysis. There is no cure for ALS, but riluzole has been used to help with the damage to the motor neurons.

AMYOTROPHIC LATERAL SCLEROSIS (ALS)

 

Resources:

  1. ALSA.org 
  2. Lougehrig.com 
  3. ...

HIF-1 beta: A Dimerization Partner of HIF-1 alpha Required for an Adaptive Response to Hypoxia

Monday, July 28, 2014 - 14:21

Hypoxia contributes significantly to the pathophysiology of major categories of human disease, including myocardial and cerebral ischemia, cancer, pulmonary hypertension, congenital heart disease and chronic obstructive pulmonary disease. Hypoxia-inducible factor 1 (HIF-1) is a nuclear protein involved in mammalian oxygen homeostasis. It is a heterodimer composed of HIF-1 alpha and HIF-1 beta subunits which are bHLH proteins of PAS (PER, ARNT, SIM) family. HIF-1 beta forms heterodimer with AHR, AHRR, HIF1 alpha and EPAS1/HIF2 alpha as well as with other bHLH proteins and its dimerization is required for efficient DNA binding.

HIF-1 beta is encoded by the ARNT (Aryl Hydrocarbon Receptor Nuclear...

Essential to Death: ATG5 (autophagy protein 5, apoptosis-specific protein ASP)

Tuesday, July 22, 2014 - 14:53

The ATG5 protein belongs to the ATG autophagy regulator family. This family controls the highly conserved cell's homeostatic response to a wide variety of both self- and foreign-originating cellular stimuli. ATG5 itself is ubiquitously expressed in most cells and most often found co-localized with the cytoplasmic non-muscle actin protein under normal resting conditions. Upon activation of apoptosis, ATG5 expression is then dramatically intensified, with ATG5 directly complexing with its ATG family members to produce autophagosomes. An intriguing application of the ATG5 antibody was done by Herd’s group where they used it to characterize the effect of silica nanomaterials on both cell uptake and toxicity in epithelial phagocytic cells1. The antibody allowed this group to monitor the effect of physicochemical manipulation of these silica-based nanoparticles on lysosomal formation and function, autophagic like activity, and...

BRCA1 - A Critical Tumor Suppressor Gene in Women

Monday, July 21, 2014 - 14:04

Breast cancer 1, early onset (BRCA1) is a well-known tumor suppressor gene that was originally discovered due to its link with early-onset breast and ovarian cancer in women. The BRCA1 protein contains the following domains: RING finger, RAD51-interaction, and BRCT (BRCA1 C-terminus). The N-terminus RING domain enables binding to several proteins - including BARD1 (BRCA1-associated RING domain protein) - allowing the formation of heterodimers. The RING finger is important for tumor suppressor activity. The RAD51-interaction domain is involved in DNA double-stranded break (DSB) repair. The loss of RAD51 binding increases cancer risk due to increased increments of damaged DNA. The BRCT functions as a transcriptional activation domain and is involved in cell-cycle control and DNA repair. BRCA1 has been implicated in a wide range of cancer-related activities, such as cell cycle progression, DNA repair, DNA damage-responsive cell cycle checkpoints, transcription regulation,...

CD4 - An Important Co-receptor Assisting TCRs

Thursday, July 17, 2014 - 14:42

The cluster of differentiation 4 (CD4) protein is a surface, type I membrane-embedded glycoprotein that is found on a wide range of cells: T-lymphocytes, B-cells, macrophages, granulocytes, and developmentally-dependent regions specific to the brain. It interacts with major histocompatibility complex (MHC) class II anti-genes, serves as the human immunodeficiency virus (HIV) receptor, and can initiate/augment early phase T-cell activation.  In immune-mediated and central nervous system (CNS) infectious diseases, CD4 indirectly mediates neuronal damage. There exists three identified CD4 splice variants, each encoding a different CD4 isoform: one with a predicted transmembrane (TM) region and two with predicted signal peptides.

Cyclooxygenase 2 (COX2, PGHS2) - I stay with Inflammation!

Monday, July 14, 2014 - 16:08

COX2 is an inducible dimeric enzyme belonging to the prostaglandin G/H synthase family that enables cells to respond to growth factors, tumor promoters, and cytokines. Prostaglandins are synthesized through the creation of cyclic endoperoxides from arachidonic acid and COX2 catalyzes the committed step in the biosynthetic pathway.  Initially identified as an immediate early growth response gene, COX2 is induced by a wide variety of stimuli such as lipopolysaccharide (LPS) and peptoglycan (PGN). COX2 is highly expressed in activated macrophages and plays a role in immune response regulation. It has been implicated as a mediator of inflammation as well as a modulator of prostanoid signaling in activity-dependent plasticity. It holds promise as both a marker in immune response regulation studies and an inflammatory disease therapeutic target....

C9RANT - A Potential Target in Neurodegenerative Diseases

Friday, July 11, 2014 - 13:41

C9RANT is a newly discovered protein-like chain that holds great potential promise as a benchmark for measuring disease activity and therapeutic response for patients with the devastating conditions of amyotrophic lateral sclerosis (ALS) and dementia. Mutations within a non-coding region of the C9ORF72 gene are responsible for 20-40% of cases of familial ALS1. This class of mutations generates repetitive, high molecular weight RNA chains which are insoluble and aggregate within the brain as C9RANT accumulations. As with the tau protein in Alzheimer's disease, C9RANT is not found in either healthy people or those with other neurologic diseases.

Your Expectations, Experience, and Evaluations of Antibody Customer Service Programs

Thursday, July 10, 2014 - 12:50

What do scientists think about customer service at places like Novus, companies that sell the antibodies that are often critical components of a wide variety of experiments? Novus ran a survey to find out, and here's what we uncovered.

There is a clear disconnect between expectations of antibodies, and how they perform in real world experiments. Seventy percent of respondents said that they expected their antibodies to work every time, but only 35% reported that this is what actually happens.

When an antibody fails, 69% of respondents expected a full refund of the cost of the antibody. But less than half felt that they had been offered a refund or a replacement product that was warranted given experimental circumstances. This finding really surprised us because Novus offers a 100% guarantee on every product—so to the majority who felt that they didn't get a refund or replacement, talk to us. We stand behind our products and want them to work...

Aromatase - A Key Enzyme in the Biosynthesis of Estrogens

Wednesday, July 9, 2014 - 14:59

The enzyme, aromatase, belongs to cytochrome P450 family of monooxygenases known for their key role in drug catabolism and cholesterol/steroid synthesis. Aromatase uses a heme-group as a co-factor to catalyze the formation of aromatic C18 estrogens from C19 androgens. This conversion includes that of testosterone into estradiol as well as androstenedione to estrone. Aromatase is a peripheral membrane protein. In addition to being found in the female reproductive tract and adipose tissue, it can also be found in testis, liver, and brain - as well as certain tumors including breast cancer. During ontogenesis, it plays an important role in CNS and gonad development, as well as sex differentiation. Defective aromatase leads to the aromatase excess syndrome (AEXS) and aromatase deficiency (AROD). Additionally, obesity has been linked to abnormally high aromatase expression in...

Blue Marker Antibody: An easy solution for BLUE-pre-stained markers

Monday, July 7, 2014 - 13:11

Western blotting is a widely used technique for the detection and analysis of proteins based on their ability to bind to specific antibodies. It was first described by Towbin, et.al in 1979 and has since become one of the most commonly used methods in life science research. In Western blotting, a mixture of proteins is separated based on molecular weight, and thus by type, through gel electrophoresis. The proteins are visualized with antibodies specific to the target under investigation. Typically pre-stained molecular weight markers are transferred alongside the target proteins enabling on-blot molecular weight sizing of the protein. However pre-stained markers are not visualized by the antibody detection methods making sizing more difficult and impractical. Novus Anti-Blue Antibody (NBP2-33376) detects BLUE-pre-stained molecular weight markers, does...

A Key to Fight Stress: ATF6

Thursday, July 3, 2014 - 13:43

The protein ATF6 is a constitutively expressed transcription factor that is a key mediator of the unfolded protein response (UPR) that allows mammalian cells to maintain cellular homeostasis under conditions of environmental and physiological stress. ATF6 is endoplasmic reticulum (ER) membrane-anchored in its inactive form, and under certain stress conditions, translocates to the Golgi where it is processed into its active form through action of the S1P and S2P proteases. This regulated intramembrane proteolysis allows the activated, N-terminal ATF6 component to then translocate to the nucleus, where it binds to ER stress-response elements in ER stress-response genes (ERSRGs). Detailed experimental methods for understanding UPR and its relationship to stress-related conditions like diabetes and neurodegeneration have been worked out and are dependent on the ATF6 antibody1.

...

ABCG8: Cholesterol's Fate

Wednesday, July 2, 2014 - 16:14

The ATP-binding cassette (ABC) transporter genes are key gatekeeper molecules that regulate the amount of dietary cholesterol retained by the body. They are a multifamily comprised of cAMP-dependent anion transporter cell membrane proteins that monitor reverse cholesterol efflux from cells into the peripheral tissues via apolipoprotein A-I (Apo). ABCG8 is expressed at high levels in the liver and intestine. Normal digestion is partially facilitated by ABCG8 and its counterpart ABCG5, which together complex into a heterodimer that transports cholesterol out of the liver and into bile. Unsurprisingly, ABCG8 mutations lead to sterol accumulation, gallstone disease, biliary cancer, hypercholesterolemia, and atherosclerosis. Studies related to diabetes, heart disease, and digestive cancer will often assess the expression, function, and ABCG5-dependent interaction of ABCG8. Kobayashi’s group performed a western blot against...

CIP2A - A lean, mean, oncoprotein machine

Monday, June 30, 2014 - 15:33

The CIP2A protein was originally identified as p90, a cytoplasmic auto-antigen from the serum of a cancer patient. It was later found to inhibit protein phosphatase 2A (PP2A) activity as well as interact with c-myc. CIP2A's inhibitory activity blocks c-myc phosphorylation and its subsequent proteolytic degradation, producing a stable c-myc that promotes aberrant cell growth and transformation. In addition to its role in c-Myc stabilization, CIP2A promotes anchorage-independent cell growth and in vivo tumor formation. Not surprisingly, CIP2A is overexpressed in certain human malignancies and is classified as a proto-oncogene. Pallai et al used the CIP2A antibody to follow-up some of their earlier studies on cell-type specific CIP2A expression in various cancer cell lines1. In these later studies, they found that the transcription factors Ets1 and Elk1 modulate expression in cervical...

MAT2A - A Protien Coding Gene

Friday, June 27, 2014 - 10:39

The enzyme S-adenosylmethionine synthetase, or MAT, catalyzes the formation of S- adenosylmethionine (AdoMet or SAMe) from methionine and ATP. AdoMet is the principal biological source of synthesized methyl, and is found in all cells but most prominently in the liver. In mammalian tissues, there are three distinct AdoMet synthases - the alpha, beta, and gamma isoforms. While the alpha and beta variants are uniquely expressed solely in the adult liver, gamma is more widely distributed in the extrahepatic tissues. Alpha and beta appear to be induced in human hepatocellular carcinoma (HCC), while patients with chronic liver disease and liver cirrhosis due to various triggers (including alcohol) have lowered levels of MAT activity as well as SAMe biosynthesis.

CAIX - One of the Best Cellular Markers of Hypoxia

Thursday, June 26, 2014 - 16:00

The protein, carbonic anhydrase IX, belongs to the carbonic anhydrase family which consists of enzymes that rapidly convert carbon dioxide and water into the end products of carbonic acid, protons, and bicarbonate ions. These enzymes play a widespread role in cells by regulating the pH of normal tissues, and are abundantly expressed in all mammalian tissues. Due to its stability and membrane location, CAIX is one of the most hypoxically-inducible genes, and has become a reliable hypoxia histochemical marker. CAIX also plays a role as an important diagnostic marker for various cancers, notably renal cell carcinoma (RCC).  A detailed multivariate analysis of prognostic factors in advanced RCC patients depended upon an antibody panel that included the CAIX antibody – this study established the utility of markers such as HIF-...

Essential for Bones: Osteoprotegerin (OPG, TNFRSF11B)

Monday, June 23, 2014 - 14:28

Also known as OPG, TR1 and OCIF, this gene encodes Osteoprotegerin, a heparin-binding secretory glycoprotein that belongs to the TNF-receptor superfamily. The TNFR superfamily consists primarily of transmembrane proteins that elicit signal transduction in a variety of cells and are known to mediate diverse biological responses, including cytotoxicity and apoptosis, Osteoprotegerin (OPG) was isolated independently by two laboratories in 1997 [1,2]. OPG comprises 401 amino acids of which 21 are a signal peptide which is cleaved and generates the mature form of the protein with 380 amino acids.  OPG is produced as a monomer (55-62 kDa), but undergoes homodimerization and is secreted as a disulphide-linked homodimeric glycoprotein with four or five potential glycosylation sites, generating a mature form of OPG of 110-120 kDa. OPG consists of 7...

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