Reactivity | HuSpecies Glossary |
Description | Tumor Tissue LysateDiagnosis: Renal cell carcinomaSex: Male Age: 57 Grade: 3 Stage: III, T2N0Mx Tumor Pathology Data Location: Right Kidney Gross findings: Tumor size 9.4 cm. Cut section, orange, hemorrhagic. Lymph nodes negative for metastatic carcinoma. Microscopic Findings Sections show a renal cell carcinoma which is composed predominantly of grade 3 tumor with enlarged nuclei, prominent nucleoli, and marked irregular nuclei. Focal areas show a spindle cell pattern which also has increased mitotic activity and is infiltrating into the adjacent kidney with focal destruction of glomeruli. The tumor is hyalinized in many foci and shows bosselating borders as well as infiltrating borders. The ureterovascular margin is negative for tumor as is the closest surgical margin. The largest geographic areas of necrosis are present within the tumor. The separately submitted paracaval lymph nodes show reactive hyperplasia without tumor. The tumor shows predominantly grade 3 morphology with focal areas of grade 4 differentiation. These represent a minority of the tumor and are present in areas showing a spindle cell (sarcomatoid) pattern of differentiation. Preparation Method Tissue specimens are homogenized in modified RIPA buffer to obtain the soluble proteins, and centrifuged to clarify. Extraction 1: PBS, pH 7.4; 1 ug/ml Aprotinin; 1 mM NaF Modified RIPA Buffer: 1 mM EDTA; 1 ug/ml Pepstatin-A; 0.1% SDS; 0.25% Na deoxycholate; 1 ug/ml Leupeptin; 1 mM PMSF; 1 mM Na3VO4 |
Application Notes | These lysates have not been subjected to denaturing or reducing conditions. This allows the tissue or cell lysate to be used in a variety of applications; to study protein-protein interaction, ligand binding, ELISA, immunoprecipitation, 1D and 2D gel electrophoresis, and Western blotting for the detection of specific protein targets. For use in 1D and 2D gel electrophoresis, the addition of a denaturing gel loading buffer with reducing agents may be required. Buffer requirements for performing protein-protein interaction and ligand binding studies can vary significantly from RIPA buffer and may require modifications. In most cases, tissue lysates in RIPA buffer can be used, directly in standard ELISA and immunoprecipitation assays. These lysates are proteomic discovery tools. Researchers should validate and optimize for individual use. |
Storage | Store at -80C. Avoid freeze-thaw cycles. |
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