Cancer and Autophagy

Research of the Month – June 2014

Autophagy and Cancer: Friend or Foe?

Autophagy is a basic catabolic process that involves cell degradation of unnecessary or dysfunctional cellular components through lysosomes. The process consists of sequential stages, including initiation, elongation, maturation and degradation, which are regulated by a series of highly conserved autophagy related genes (Atgs) involved in various signaling pathways.

Autophagy contributes to the pathogenesis of diverse diseases such as neurodegeneration and cancer. In cancer initiation and development autophagy plays a dual role: on one hand, autophagy eliminates senescent and injured cells and suppresses tumor initiation. Autophagy deficiency by the deletion of Atgs in mice causes a high incidence of spontaneous tumors. On the other hand, autophagy provides energy to maintain energy balance by recycling damaged organelles, DNA, aggregated proteins and pathogens, which promotes cancer cell survival.

While the functional relevance of autophagy in cancer remains controversial, Novus Biologicals devotes to providing high quality antibodies for the Autophagy research community to solve the scientific puzzle, explore the discoveries and advance autophagy research into its clinical applications.


Table 1. Major autophagy related targets

Yeast Mammalians Functions
Atg1 ULK1,
ULK2
Atg1-Atg13-Atg17-Atg29 complex
Atg2 Atg2 Atg9/ Atg2-Atg18 complex
Atg3 Atg3 E2-like enzyme for Atg8s-lipidation
Atg4 Atg4A, B, C, D Atg8s activation and delipidation
Atg5 Atg5 Atg12-Atg5 complex: E3-like activity for Atg8s lipidation
Atg6 Beclin-1 Subunit of Vps34-PI3K complex
Atg7 Atg7 E1-like enzyme for Atg12- and LC3-conjugation
Atg8 LC3A/B/C,
GABARAP,
GABARAPL1/2
Conjugates to PE to localize to autophagosome
Atg9 Atg9A,
Atg9B
Atg9/ Atg2-Atg18 complex
Atg10 Atg10 E2-like enzyme for Atg12 conjugation
Atg11   Scaffold protein in selective autophagy for PAS organization
Atg12 Atg12 Conjugates to Atg5
Atg13 Atg13 Atg1-Atg13-Atg17-Atg29 complex
Atg14 Atg14 Subunit of Vps34-PI3K complex
Atg16 Atg16L1 Complex between Atg16 and Atg12-Atg5 conjugates
Atg17 FIP200/ RB1CC1 Atg1-Atg13-Atg17-Atg29 complex
Atg18 WIPI-1, 2, 3, 4 Atg9/ Atg2-Atg18 complex
Atg29   Ternary complex with Atg17 and Atg31
Atg31   Ternary complex with Atg17 and Atg29

Table 2. Major Regulators of Autophagy

Regulators Outcome
mTOR pathway

Class I PI3K

S6K

p38 MAPK
Inhibition of Autophagy
Class III PI3K/ Beclin-1

ERK1/2

TRAIL-R

TNF-R

FADD

JNK

DAPK

DRP-1

Ceramide

BNIP3

TFEB
Activation of Autophagy


Here we also highlight the following proteins in the core machinery of autophagosome formation that we’re offering to help and speed up your investigations on the puzzle between Autophagy and Cancer.

Atg1/ ULK complex
ULK1 Ab

NBP2-24738
ATG13 Ab

NBP2-15502
FIP200 Ab

NB100-77279



Atg9 cycling system
ATG2B Ab

NBP1-90732
ATG9B Ab

NBP1-77169
WIPI 2 Ab

NBP2-20906


PI3K complex
VPS34 Ab

NB110-87320
VPS15 Ab

NBP1-30463
Beclin 1 Ab

NB500-249


Atg8 Ubl conjugation system
p62/ SQSTM1 Ab

NBP1-42821
LC3 Ab

NBP2-24394
GABARAP Ab

NBP1-97416
ATG4B Ab

NBP2-24709
ATG7 Ab

NBP1-95872
LC3B Ab

NB600-1384


Atg12 Ubl conjugation system
ATG5 Ab

NB110-53818
ATG12 Ab

NBP2-15501
ATG16L1 Ab

NB110-60928